Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948658.1_cds_XP_016489843.1_80328
CDS Infomation

[gene=LOC107809696] [db_xref=GeneID:107809696] [protein=TBCC domain-containing protein 1-like] [protein_id=XP_016489843.1] [location=complement(join(41715..41758,41846..41957,42115..42207,42408..42611,44244..44384,45437..45541,47105..47485,47844..47984,48286..48777))] [gbkey=CDS]
Sequence

ATGGCGGAAGCCGACGAACAACCACCGCCATCGACGCTGTCCACGGCGTCGTCAACGGCC
CCAATTTACATACATCCACGAAGAGAGCCATTCCAACATGGCCTTCTCCCAATCTCTAAA
CTCATCTTCACCGACGGCACTCAAACTCTTCTTCCAATTCGAGATAAGCTATTATCCCTA
ACCTCCGGCTCCGCTCACCGAGCCAATTTCGAAGCAATTGCCGAAGCACTTCAGATCTCG
CATGAGCATGCTCGCCTTGTCCTTGAGACAATTGCCTCCGTTCTCCACTCCGATTCTGAT
CCAATCGTCACCGCTAAGCCATCGGAGATCGGCTCCGTTGGCGTCAACGTGTTCGATTTG
ATGTTGTTTTTGCACATTCAGAGTTATAAAAGGCTTCTTCCTAAAGGACATAAGGATTCC
GCTGCAGTAGCTGATGTTTGGCCTTCTACATCCGCCTTCGACGGTTTCTTATCGGCTCTT
TCGCCGTTGCAGCTCGTACGCAGCAATAGTCGGCGGTTTATGCCATCACAGGCTGATGAA
GAGGCTCATCAATTATCCTATTTACAGAAACACTTGGGGAACATTCTTTCTCTTTTGGCA
GAGTCAGTGGAAGGGGATGGTGAAGAATCACTGGTTTTGTCTATGGAGAAATTGGAGCAT
CTGGGCTTCCTAATCTATTTTGGTGAAAAGGGATATGAGAGAATCCCATTGAGTCAGAAT
GCCCCTTTTTTTGCCAATTCAGATCCAGAGATGCCTGCTGTTCCTGTTCCTGCAGCTCAA
GTACACGACTGGCTTCTAGAAAATATAGCATCTGCTTTGGAACGAATTACTGAGAGGGCT
TCTGCAAAGGAAAATGGACCAAGCAGTGCCTCTGATCAGGATGTACCAATGGCTGATGTC
GCTGCAAGTTCAGTGAAGAGTTCGTCAACTTCTAGAGGACCAAGTTTCATTGAAGGAATT
TCCAAATCATCATATGTAAGGCTGCCAAATGATATTAAAGGCTCCTCTGTAAAGGTTGTC
AATTGCCATGAATCAGTCATTTATATTTTAGCTCCTTTGAAATATGCGACAGTATATGGA
TGCTCTGATGCAACTATTGTCCTGGGAGCTGTGGGCAAGGCAGTCAGAATTGAGCACTGT
GAACGTGTACACGTGATTGCAGCAGCAAAACGTATTTGTATTGCCAACTGTCGTGAATGC
ATATTCTTCTTGGGAGTAAACCAGACACCACTTCTTGTTGGGGATAACCATAAATTGCAG
GTGGCTCCATACAATACTTTTTACTCGCTACTGGAGGAACACCTGAATCAAGTTGGTATT
GACCCAACCATCAACAGATGGGATGCACCTGTAGCTCTTGGTGTTGTTGACCCACATGAT
TCACTGTCACATCCTGCTGGTGTGTCTGATGTTCAAACTGAGTTTGCTATCCCTGTAGAC
CCTGATCAGTTCACTAACTTTTTGATTCCAAACTGGTTTGAAGGGCAGCATTCTGGGTCC
ACGAAAGATAATCCATTCCCTTTACCGGATGCTTATTTGGCATCCCAGCAGAGAAATCAC
AAAAACTTGGAGGAGAATAAGCGTATGTTGAAGGACACCGAGCTTGACGAGACTCGGAAG
CGAGAAGTAGCAACTGCTCTCCATGCGTGCTTTAAGGACTGGTTATATGCTTCAGGAAAT
ATACGGCAACTATACTGTCTTCAAGGTGATTAG

Peptide Sequence

PEP ID

XP_016489843.1
PEP Infomation

PREDICTED: TBCC domain-containing protein 1-like [Nicotiana tabacum]
Sequence

MAEADEQPPPSTLSTASSTAPIYIHPRREPFQHGLLPISKLIFTDGTQTLLPIRDKLLSL
TSGSAHRANFEAIAEALQISHEHARLVLETIASVLHSDSDPIVTAKPSEIGSVGVNVFDL
MLFLHIQSYKRLLPKGHKDSAAVADVWPSTSAFDGFLSALSPLQLVRSNSRRFMPSQADE
EAHQLSYLQKHLGNILSLLAESVEGDGEESLVLSMEKLEHLGFLIYFGEKGYERIPLSQN
APFFANSDPEMPAVPVPAAQVHDWLLENIASALERITERASAKENGPSSASDQDVPMADV
AASSVKSSSTSRGPSFIEGISKSSYVRLPNDIKGSSVKVVNCHESVIYILAPLKYATVYG
CSDATIVLGAVGKAVRIEHCERVHVIAAAKRICIANCRECIFFLGVNQTPLLVGDNHKLQ
VAPYNTFYSLLEEHLNQVGIDPTINRWDAPVALGVVDPHDSLSHPAGVSDVQTEFAIPVD
PDQFTNFLIPNWFEGQHSGSTKDNPFPLPDAYLASQQRNHKNLEENKRMLKDTELDETRK
REVATALHACFKDWLYASGNIRQLYCLQGD

Transcript Sequence

Gene sequence data has not been registered.